RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Top1mtQ8R4U6 593 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 PtmsQ9D0J8 101 aaKnown RBP8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Cep170bQ80U49 1574 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Mcm4P49717 862 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 EvcP57680 1005 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Clcn1Q64347 994 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Sf3a1Q8K4Z5 791 aaKnown RBP8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Lmbr1lQ9D1E5 489 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Utp3Q9JI13 469 aaKnown RBP8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Txnrd1Q9JMH6 613 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Adgrl1Q80TR1 1466 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Samd1D3YXK1 519 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Arhgef1Q61210 920 aaKnown RBP8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 IbspQ61711 324 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Fkbp5Q64378 456 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 ApobrQ8VBT6 942 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 GckrQ91X44 587 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Zbtb22Q9Z0G7 638 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Hs1bp3Q3TC93 395 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 VeztQ3ZK22 780 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Irf9Q61179 399 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ccer1Q9CQL2 403 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Q9D9S1 216 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ercc6l2Q9JIM3 1537 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Cul9Q80TT8 1865 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Atg4a-psA0A0G2JFS9 396 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 4930572O03RikQ8C5Y0 211 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Atg4aQ8C9S8 396 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 OptnQ8K3K8 584 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 LratQ9JI60 231 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 FancaQ9JL70 1439 aa8.33□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Astn2Q80Z10 1352 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Cdc42bpgQ80UW5 1551 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Rasa1E9PYG6 1038 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Hspa2P17156 633 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Zbtb3Q91X45 518 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Stard3nlQ9DCI3 235 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 PzpQ61838 1495 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Gdpd2Q9ESM6 539 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Dip2cE9PWR4 1557 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Gjb2Q00977 226 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ints3Q7TPD0 1041 aaKnown RBP8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Gripap1Q8VD04 806 aa8.32□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Abl1P00520 1123 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Nap1l3Q794H2 544 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Tmc1Q8R4P5 757 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Bicd2Q921C5 820 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Pik3r4Q8VD65 1358 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Tpx2A2APB8 745 aaKnown RBP8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Atp8b2P98199 1209 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Nucb1Q02819 459 aaKnown RBP8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Echdc1Q9D9V3 322 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Syce3B5KM66 88 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Tlr7P58681 1050 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Eif3bQ8JZQ9 803 aaKnown RBP8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 RestQ8VIG1 1082 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Amotl1Q9D4H4 968 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Uggt1Q6P5E4 1551 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Knl1Q66JQ7 1612 aa8.31□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Xrn1P97789 1719 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Wdr78E9PYY5 807 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 VgfQ0VGU4 617 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Rnf20Q5DTM8 973 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Slx4ipQ9D7Y9 413 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 RereQ80TZ9 1558 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 PnnO35691 725 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Cnnm3Q32NY4 713 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Sf3b2Q3UJB0 878 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 EappQ5BU09 281 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Cavin2Q63918 418 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Sh3bgrQ9WUZ7 214 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Prex1Q69ZK0 1650 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Bicdl1A0JNT9 577 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ets1P27577 440 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Kif20aP97329 887 aa8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ddx46Q569Z5 1032 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 AnlnQ8K298 1121 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Gigyf1Q99MR1 1044 aaKnown RBP8.3□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Ier5O89113 308 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Kif4P33174 1231 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Adam1aQ60813 791 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Bag4Q8CI61 457 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Flad1Q8R123 492 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Hnrnpul1Q8VDM6 859 aaKnown RBP8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Myom2Q14BI5 1463 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Kif24Q6NWW5 1356 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Adgrb3Q80ZF8 1522 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Gm10093D3YYI8 482 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Hdac1O09106 482 aaKnown RBP8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 EspnlQ3UYR4 1005 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Kdm4aQ8BW72 1064 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 GptQ8QZR5 496 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Bloc1s4Q8VED2 215 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Bicc1Q99MQ1 977 aaKnown RBP8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 CenppQ9CZ92 286 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Tbc1d7Q9D0K0 293 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Alpk3Q924C5 1678 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 NmiO35309 314 aa8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Dnajc2P54103 621 aaKnown RBP8.29□□□□□ -1.08
Col6a6-201ENSMUST00000060896 Chl1P70232 1209 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms