RNA–Protein interactions for RNA: ENSMUST00000048065.5

Trem3-201, Transcript of TREM-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem3, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3-201ENSMUST00000048065 Syde2E9PUP1 1314 aa16.76■□□□□ 0.27
Trem3-201ENSMUST00000048065 Rtf1A2AQ19 715 aaKnown RBP16.76■□□□□ 0.27
Trem3-201ENSMUST00000048065 Tlr8P58682 1032 aa16.76■□□□□ 0.27
Trem3-201ENSMUST00000048065 PigbQ9JJQ0 542 aa16.75■□□□□ 0.27
Trem3-201ENSMUST00000048065 Usp21Q9QZL6 566 aa16.75■□□□□ 0.27
Trem3-201ENSMUST00000048065 Mapk8ip3Q9ESN9 1337 aa16.74■□□□□ 0.27
Trem3-201ENSMUST00000048065 Exoc6Q8R313 802 aa16.74■□□□□ 0.27
Trem3-201ENSMUST00000048065 RtcbQ99LF4 505 aaKnown RBP16.74■□□□□ 0.27
Trem3-201ENSMUST00000048065 Lrp5Q91VN0 1614 aa16.74■□□□□ 0.27
Trem3-201ENSMUST00000048065 Zswim8Q3UHH1 1832 aaKnown RBP16.73■□□□□ 0.27
Trem3-201ENSMUST00000048065 Sned1Q70E20 1403 aa16.73■□□□□ 0.27
Trem3-201ENSMUST00000048065 Btbd11Q6GQW0 1109 aa16.73■□□□□ 0.27
Trem3-201ENSMUST00000048065 Magea6O89010 325 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Prim1P20664 417 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Ggnbp2Q5SV77 696 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Magea3Q6T340 320 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Trpm3Q5F4S9 1721 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Ubr2Q6WKZ8 1755 aa16.72■□□□□ 0.27
Trem3-201ENSMUST00000048065 Srp68Q8BMA6 625 aaKnown RBP16.71■□□□□ 0.27
Trem3-201ENSMUST00000048065 Znrd1-asQ8R0E5 213 aa16.71■□□□□ 0.27
Trem3-201ENSMUST00000048065 Abcc12Q80WJ6 1366 aa16.71■□□□□ 0.27
Trem3-201ENSMUST00000048065 Zcwpw1Q6IR42 630 aa16.7■□□□□ 0.26
Trem3-201ENSMUST00000048065 Strn4P58404 760 aa16.69■□□□□ 0.26
Trem3-201ENSMUST00000048065 1810065E05RikQ5NC41 235 aa16.69■□□□□ 0.26
Trem3-201ENSMUST00000048065 Zbtb1Q91VL9 713 aa16.69■□□□□ 0.26
Trem3-201ENSMUST00000048065 Spata31d1bE9QA57 1361 aa16.68■□□□□ 0.26
Trem3-201ENSMUST00000048065 Pde4dQ01063 747 aa16.68■□□□□ 0.26
Trem3-201ENSMUST00000048065 Col11a2Q64739 1736 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Tnnt1O88346 262 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Cnnm1Q0GA42 951 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Lrrc43Q3V0L5 667 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 DiexfQ8BTT6 772 aaKnown RBP16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Egfem1Q8C088 590 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Amhr2Q8K592 568 aa16.67■□□□□ 0.26
Trem3-201ENSMUST00000048065 Pibf1E9Q6K3 756 aa16.66■□□□□ 0.26
Trem3-201ENSMUST00000048065 Slurp2P0DP59 97 aa16.66■□□□□ 0.26
Trem3-201ENSMUST00000048065 Bcl2l13P59017 434 aa16.66■□□□□ 0.26
Trem3-201ENSMUST00000048065 Atp1b3P97370 278 aa16.66■□□□□ 0.26
Trem3-201ENSMUST00000048065 HmcesQ8R1M0 353 aaKnown RBP16.66■□□□□ 0.26
Trem3-201ENSMUST00000048065 Ubr3Q5U430 1889 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Tiam2Q6ZPF3 1715 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Ric1Q69ZJ7 1422 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Esx1O88933 382 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Nip7Q9CXK8 180 aaKnown RBP16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Tktl2Q9D4D4 627 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Trip6Q9Z1Y4 480 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 C4bP01029 1738 aa16.65■□□□□ 0.26
Trem3-201ENSMUST00000048065 Adcy9P51830 1353 aa16.64■□□□□ 0.26
Trem3-201ENSMUST00000048065 Klhdc4Q921I2 584 aa16.64■□□□□ 0.25
Trem3-201ENSMUST00000048065 Kcnn1Q9EQR3 537 aa16.64■□□□□ 0.25
Trem3-201ENSMUST00000048065 Cyp2c67Q569X9 491 aa16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Gm12185Q5NCB2 835 aa16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Prkab2Q6PAM0 271 aa16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Golga2Q921M4 999 aa16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Mrps5Q99N87 432 aaKnown RBP16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Nsfl1cQ9CZ44 370 aaKnown RBP16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Nav1Q8CH77 1875 aa16.63■□□□□ 0.25
Trem3-201ENSMUST00000048065 Kndc1Q0KK55 1742 aa16.62■□□□□ 0.25
Trem3-201ENSMUST00000048065 Col4a1P02463 1669 aa16.62■□□□□ 0.25
Trem3-201ENSMUST00000048065 Zfyve9A2A8R0 1397 aa16.62■□□□□ 0.25
Trem3-201ENSMUST00000048065 Cavin4A2AMM0 362 aa16.61■□□□□ 0.25
Trem3-201ENSMUST00000048065 TefQ9JLC6 301 aa16.61■□□□□ 0.25
Trem3-201ENSMUST00000048065 Plch1Q4KWH5 1682 aa16.61■□□□□ 0.25
Trem3-201ENSMUST00000048065 Atf7ipQ7TT18 1306 aa16.61■□□□□ 0.25
Trem3-201ENSMUST00000048065 Myo5bP21271 1818 aa16.61■□□□□ 0.25
Trem3-201ENSMUST00000048065 1700019A02RikA0A087WPV9 146 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Stra8P70278 393 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Dusp27Q148W8 1138 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Cyp2d12Q8BVD2 504 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Slc39a6Q8C145 765 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Sgip1Q8VD37 806 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Swt1Q9DBQ9 907 aa16.6■□□□□ 0.25
Trem3-201ENSMUST00000048065 Iqsec3Q3TES0 1195 aa16.59■□□□□ 0.25
Trem3-201ENSMUST00000048065 Gpr162Q3UN16 588 aa16.59■□□□□ 0.25
Trem3-201ENSMUST00000048065 Flad1Q8R123 492 aa16.59■□□□□ 0.25
Trem3-201ENSMUST00000048065 ScaperF8VQ70 1398 aaKnown RBP16.59■□□□□ 0.25
Trem3-201ENSMUST00000048065 Fkbp4P30416 458 aa16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Eif4a1P60843 406 aaKnown RBP16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Mylk2Q8VCR8 613 aa16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Rnaseh2aQ9CWY8 301 aa16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Taf1dQ9D4V4 322 aa16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Rapgef4Q9EQZ6 1011 aa16.58■□□□□ 0.24
Trem3-201ENSMUST00000048065 Cyp2c69E9PXC3 491 aa16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Cyp2c40P56657 491 aa16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Map4k4P97820 1233 aaKnown RBP16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Zscan21Q07231 555 aa16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Rnf180Q3U827 592 aa16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Mrs2Q5NCE8 434 aa16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 Pdia6Q922R8 440 aaKnown RBP16.57■□□□□ 0.24
Trem3-201ENSMUST00000048065 MetP16056 1379 aa16.56■□□□□ 0.24
Trem3-201ENSMUST00000048065 Prr5lA2AVJ5 370 aa16.56■□□□□ 0.24
Trem3-201ENSMUST00000048065 Ppef1O35655 650 aa16.56■□□□□ 0.24
Trem3-201ENSMUST00000048065 U2surpQ6NV83 1029 aaKnown RBP16.56■□□□□ 0.24
Trem3-201ENSMUST00000048065 Camkk2Q8C078 588 aa16.56■□□□□ 0.24
Trem3-201ENSMUST00000048065 Uhrf1bp1B2KF50 1429 aa16.55■□□□□ 0.24
Trem3-201ENSMUST00000048065 Gigyf1Q99MR1 1044 aaKnown RBP16.55■□□□□ 0.24
Trem3-201ENSMUST00000048065 Slc34a2Q9DBP0 697 aa16.55■□□□□ 0.24
Trem3-201ENSMUST00000048065 Togaram1Q6A070 1776 aaKnown RBP16.54■□□□□ 0.24
Trem3-201ENSMUST00000048065 Col1a2Q01149 1372 aa16.54■□□□□ 0.24
Trem3-201ENSMUST00000048065 Tgfb2P27090 414 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms