RNA–Protein interactions for RNA: ENSMUST00000048065.5

Trem3-201, Transcript of TREM-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem3, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3-201ENSMUST00000048065 Gm35339A0A140LHH9 1649 aa28.83■■■□□ 2.21
Trem3-201ENSMUST00000048065 NischQ80TM9 1593 aa28.54■■■□□ 2.16
Trem3-201ENSMUST00000048065 Abcc8B2RUS7 1588 aa27.62■■■□□ 2.01
Trem3-201ENSMUST00000048065 Abcc9P70170 1546 aa27.57■■■□□ 2
Trem3-201ENSMUST00000048065 ScribQ80U72 1612 aa26.72■■□□□ 1.87
Trem3-201ENSMUST00000048065 NacadQ5SWP3 1504 aa25.83■■□□□ 1.73
Trem3-201ENSMUST00000048065 Kdm5dQ62240 1548 aa25.83■■□□□ 1.72
Trem3-201ENSMUST00000048065 Sycp2Q9CUU3 1500 aa25.35■■□□□ 1.65
Trem3-201ENSMUST00000048065 Dcaf1Q80TR8 1506 aa25.27■■□□□ 1.64
Trem3-201ENSMUST00000048065 BicraF8VPZ9 1578 aa25.05■■□□□ 1.6
Trem3-201ENSMUST00000048065 Rb1cc1Q9ESK9 1588 aa24.88■■□□□ 1.57
Trem3-201ENSMUST00000048065 Rhox8Q6VSS7 320 aa24.79■■□□□ 1.56
Trem3-201ENSMUST00000048065 Dnajc5bQ9CQ94 199 aa24.73■■□□□ 1.55
Trem3-201ENSMUST00000048065 Mapk8ip2Q9ERE9 830 aa24.6■■□□□ 1.53
Trem3-201ENSMUST00000048065 Baz1aO88379 1555 aa24.48■■□□□ 1.51
Trem3-201ENSMUST00000048065 Ccdc180J3QNE4 1664 aa24.47■■□□□ 1.51
Trem3-201ENSMUST00000048065 Pds5bQ4VA53 1446 aaKnown RBP24.33■■□□□ 1.49
Trem3-201ENSMUST00000048065 Crybg2B7ZCC2 1516 aa24.31■■□□□ 1.48
Trem3-201ENSMUST00000048065 Zcchc6Q5BLK4 1491 aaKnown RBP24.29■■□□□ 1.48
Trem3-201ENSMUST00000048065 Thoc2B1AZI6 1594 aaKnown RBP24.15■■□□□ 1.46
Trem3-201ENSMUST00000048065 Atad2bE9Q166 1460 aaKnown RBP24.08■■□□□ 1.45
Trem3-201ENSMUST00000048065 Cecr2E9Q2Z1 1453 aa23.86■■□□□ 1.41
Trem3-201ENSMUST00000048065 Ercc6F8VPZ5 1481 aa23.85■■□□□ 1.41
Trem3-201ENSMUST00000048065 Smarca4Q3TKT4 1613 aaKnown RBP23.83■■□□□ 1.41
Trem3-201ENSMUST00000048065 Cc2d2aQ8CFW7 1633 aa23.83■■□□□ 1.41
Trem3-201ENSMUST00000048065 Smarca2Q6DIC0 1577 aa23.82■■□□□ 1.4
Trem3-201ENSMUST00000048065 Iqgap2Q3UQ44 1575 aa23.74■■□□□ 1.39
Trem3-201ENSMUST00000048065 Fam135aQ6NS59 1506 aa23.58■■□□□ 1.36
Trem3-201ENSMUST00000048065 Frmpd1A2AKB4 1549 aa23.56■■□□□ 1.36
Trem3-201ENSMUST00000048065 Wdr62Q3U3T8 1523 aa23.54■■□□□ 1.36
Trem3-201ENSMUST00000048065 Phldb1Q6PDH0 1371 aaKnown RBP23.43■■□□□ 1.34
Trem3-201ENSMUST00000048065 Ubl4bQ9CQ84 188 aa23.35■■□□□ 1.33
Trem3-201ENSMUST00000048065 Rtl1Q7M732 1744 aa23.33■■□□□ 1.32
Trem3-201ENSMUST00000048065 Baz1bQ9Z277 1479 aa23.31■■□□□ 1.32
Trem3-201ENSMUST00000048065 Ccdc136Q3TVA9 1136 aa23.25■■□□□ 1.31
Trem3-201ENSMUST00000048065 CftrP26361 1476 aa23.21■■□□□ 1.31
Trem3-201ENSMUST00000048065 Synj1Q8CHC4 1574 aa23.18■■□□□ 1.3
Trem3-201ENSMUST00000048065 Unc13aQ4KUS2 1712 aa23.16■■□□□ 1.3
Trem3-201ENSMUST00000048065 Cttnbp2B9EJA2 1648 aa23.12■■□□□ 1.29
Trem3-201ENSMUST00000048065 Brd4Q9ESU6 1400 aaKnown RBP23.09■■□□□ 1.29
Trem3-201ENSMUST00000048065 Mrc2Q64449 1479 aa23.08■■□□□ 1.29
Trem3-201ENSMUST00000048065 Esf1Q3V1V3 845 aaKnown RBP22.95■■□□□ 1.26
Trem3-201ENSMUST00000048065 Kif15Q6P9L6 1387 aa22.75■■□□□ 1.23
Trem3-201ENSMUST00000048065 Cux2P70298 1426 aa22.74■■□□□ 1.23
Trem3-201ENSMUST00000048065 Chic1Q8CBW7 227 aa22.73■■□□□ 1.23
Trem3-201ENSMUST00000048065 Trim41Q5NCC3 630 aa22.72■■□□□ 1.23
Trem3-201ENSMUST00000048065 Rsf1E9PWW9 1441 aaKnown RBP22.72■■□□□ 1.23
Trem3-201ENSMUST00000048065 Lrriq1Q0P5X1 1673 aa22.58■■□□□ 1.2
Trem3-201ENSMUST00000048065 Kif21aQ9QXL2 1672 aa22.54■■□□□ 1.2
Trem3-201ENSMUST00000048065 Lamc3Q9R0B6 1581 aa22.52■■□□□ 1.2
Trem3-201ENSMUST00000048065 Npm1Q61937 292 aaKnown RBP22.52■■□□□ 1.2
Trem3-201ENSMUST00000048065 Il27Q8K3I6 234 aa22.42■■□□□ 1.18
Trem3-201ENSMUST00000048065 Cngb1E1AZ71 1325 aa22.39■■□□□ 1.18
Trem3-201ENSMUST00000048065 Dnajc5P60904 198 aa22.37■■□□□ 1.17
Trem3-201ENSMUST00000048065 Cep164Q5DU05 1446 aa22.36■■□□□ 1.17
Trem3-201ENSMUST00000048065 Golga3P55937 1487 aa22.28■■□□□ 1.16
Trem3-201ENSMUST00000048065 Dhx29Q6PGC1 1365 aaKnown RBP22.25■■□□□ 1.15
Trem3-201ENSMUST00000048065 Urb2E9Q7L1 1524 aaKnown RBP22.22■■□□□ 1.15
Trem3-201ENSMUST00000048065 Ccdc18Q640L5 1455 aa22.22■■□□□ 1.15
Trem3-201ENSMUST00000048065 Eif4g3Q80XI3 1579 aaKnown RBP22.21■■□□□ 1.15
Trem3-201ENSMUST00000048065 Plb1Q3TTY0 1478 aa22.21■■□□□ 1.15
Trem3-201ENSMUST00000048065 TnnQ80Z71 1560 aa22.21■■□□□ 1.15
Trem3-201ENSMUST00000048065 Top2bQ64511 1612 aa22.2■■□□□ 1.15
Trem3-201ENSMUST00000048065 LrpprcQ6PB66 1392 aaKnown RBP22.15■■□□□ 1.14
Trem3-201ENSMUST00000048065 Camsap1A2AHC3 1581 aa22.12■■□□□ 1.13
Trem3-201ENSMUST00000048065 Crocc2F6XLV1 1638 aa22.06■■□□□ 1.12
Trem3-201ENSMUST00000048065 Fmn1Q05860 1466 aa22.01■■□□□ 1.11
Trem3-201ENSMUST00000048065 PogzQ8BZH4 1409 aaKnown RBP22■■□□□ 1.11
Trem3-201ENSMUST00000048065 Shroom2A2ALU4 1481 aa21.99■■□□□ 1.11
Trem3-201ENSMUST00000048065 Duox2A2AQ99 1517 aa21.91■■□□□ 1.1
Trem3-201ENSMUST00000048065 Ift140E9PY46 1464 aa21.9■■□□□ 1.1
Trem3-201ENSMUST00000048065 Pabpn1Q8CCS6 302 aaKnown RBP21.89■■□□□ 1.09
Trem3-201ENSMUST00000048065 Pelp1Q9DBD5 1123 aaKnown RBP21.87■■□□□ 1.09
Trem3-201ENSMUST00000048065 Rusc2Q80U22 1514 aa21.85■■□□□ 1.09
Trem3-201ENSMUST00000048065 Grin2bQ01097 1482 aa21.83■■□□□ 1.08
Trem3-201ENSMUST00000048065 Disp1Q3TDN0 1521 aa21.8■■□□□ 1.08
Trem3-201ENSMUST00000048065 Col17a1Q07563 1470 aa21.78■■□□□ 1.08
Trem3-201ENSMUST00000048065 Ccdc88bQ4QRL3 1481 aa21.74■■□□□ 1.07
Trem3-201ENSMUST00000048065 Samd9lQ69Z37 1561 aa21.74■■□□□ 1.07
Trem3-201ENSMUST00000048065 Rad54l2Q99NG0 1466 aa21.68■■□□□ 1.06
Trem3-201ENSMUST00000048065 Efcab5A0JP43 1406 aa21.66■■□□□ 1.06
Trem3-201ENSMUST00000048065 Nup160Q9Z0W3 1402 aaKnown RBP21.65■■□□□ 1.06
Trem3-201ENSMUST00000048065 Pbrm1Q8BSQ9 1634 aaKnown RBP21.61■■□□□ 1.05
Trem3-201ENSMUST00000048065 Cc2d2bA0A286YDU8 1405 aa21.61■■□□□ 1.05
Trem3-201ENSMUST00000048065 Top2aQ01320 1528 aaKnown RBP21.56■■□□□ 1.04
Trem3-201ENSMUST00000048065 Setd1bQ8CFT2 1985 aa21.56■■□□□ 1.04
Trem3-201ENSMUST00000048065 Magi3Q9EQJ9 1476 aa21.54■■□□□ 1.04
Trem3-201ENSMUST00000048065 Grin2aP35436 1464 aa21.53■■□□□ 1.04
Trem3-201ENSMUST00000048065 PtprkP35822 1457 aa21.53■■□□□ 1.04
Trem3-201ENSMUST00000048065 NrkQ9R0G8 1455 aa21.52■■□□□ 1.03
Trem3-201ENSMUST00000048065 AqrQ8CFQ3 1481 aaKnown RBP21.48■■□□□ 1.03
Trem3-201ENSMUST00000048065 Zeb1Q64318 1117 aa21.46■■□□□ 1.03
Trem3-201ENSMUST00000048065 Shroom4Q1W617 1475 aa21.45■■□□□ 1.03
Trem3-201ENSMUST00000048065 Fgd6Q69ZL1 1399 aa21.45■■□□□ 1.02
Trem3-201ENSMUST00000048065 Zcchc11B2RX14 1644 aaKnown RBP21.43■■□□□ 1.02
Trem3-201ENSMUST00000048065 Pla2r1Q62028 1487 aa21.41■■□□□ 1.02
Trem3-201ENSMUST00000048065 AknaQ80VW7 1404 aa21.39■■□□□ 1.02
Trem3-201ENSMUST00000048065 SynmQ70IV5 1561 aa21.37■■□□□ 1.01
Trem3-201ENSMUST00000048065 Adgrl3Q80TS3 1537 aa21.34■■□□□ 1.01
Trem3-201ENSMUST00000048065 Gapvd1Q6PAR5 1458 aa21.33■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms