RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 IghaA0A0A6YXW6 389 aa20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Q3TQI7 289 aaKnown RBP20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 HnrnpmQ9D0E1 729 aaKnown RBP20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Pik3c2bE9QAN8 1632 aa20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Mmp8O70138 465 aa20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Parp14Q2EMV9 1817 aa20.35■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Cwc27Q3TKY6 469 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Gzf1Q4VBD9 706 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 E4f1Q8CCE9 783 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Tnrc6bQ8BKI2 1810 aaKnown RBP20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Gse1Q3U3C9 1213 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Nol12Q8BG17 217 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Kdm4aQ8BW72 1064 aa20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Cdk12Q14AX6 1484 aaKnown RBP20.34■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Nol8Q3UHX0 1147 aaKnown RBP20.33■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Jakmip1Q8BVL9 626 aa20.33■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Pnma3Q8JZW8 466 aa20.33■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Tet3Q8BG87 1668 aa20.33■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Astn2Q80Z10 1352 aa20.33■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Atp6v1dP57746 247 aa20.32■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Ccne1Q61457 408 aa20.32■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Glipr1l2Q9CQ35 332 aa20.32■□□□□ 0.84
Lsm1-201ENSMUST00000038421 PzpQ61838 1495 aa20.32■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Chd1lQ9CXF7 900 aa20.31■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Atp8b2P98199 1209 aa20.3■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Med1Q925J9 1575 aa20.3■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Tpx2A2APB8 745 aaKnown RBP20.3■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Anapc15P60007 132 aa20.3■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.29■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Irf5P56477 497 aa20.29■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Pmfbp1Q9WVQ0 1022 aa20.29■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Tnnt1O88346 262 aa20.28■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Eya1P97767 591 aa20.28■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Pdzrn3Q69ZS0 1063 aa20.28■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Ppp1r18Q8BQ30 594 aa20.28■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Cps1Q8C196 1500 aa20.28■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Smarce1O54941 411 aaKnown RBP20.27■□□□□ 0.84
Lsm1-201ENSMUST00000038421 KinQ8K339 391 aa20.27■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Msh6P54276 1358 aaKnown RBP20.27■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Dip2bQ3UH60 1574 aa20.27■□□□□ 0.84
Lsm1-201ENSMUST00000038421 Mcmdc2E9Q956 681 aa20.27■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Mindy4Q3UQI9 744 aa20.27■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Slx4ipQ9D7Y9 413 aa20.27■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Olfml1Q8BSH2 233 aa20.26■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Frmpd2A0A140LI67 1392 aa20.26■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Sox12Q04890 314 aa20.26■□□□□ 0.83
Lsm1-201ENSMUST00000038421 FancaQ9JL70 1439 aa20.25■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Utp18Q5SSI6 552 aaKnown RBP20.25■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Cabp4Q8VHC5 271 aa20.25■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Irx6Q9ER75 438 aa20.25■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Elmsan1E9Q2I4 1089 aaKnown RBP20.25■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Foxp4Q9DBY0 795 aaKnown RBP20.24■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Stk36Q69ZM6 1316 aa20.24■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Igsf1Q7TQA1 1317 aa20.24■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Unc5clQ6R653 518 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Mlh1Q9JK91 760 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Sytl4Q9R0Q1 673 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Disp3A3KFU9 1347 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Q3UJC8 639 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Naa30Q8CES0 364 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Stk3Q9JI10 497 aa20.23■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Chpf2Q3UU43 768 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Casc1Q6TDU8 730 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Ccdc7Q9D541 371 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Nckap5lQ6GQX2 1323 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 CemipQ8BI06 1361 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Ms4a2P20490 235 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Strn4P58404 760 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Ddx19aQ61655 478 aaKnown RBP20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Anp32cQ64G17 123 aa20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Ccar2Q8VDP4 922 aaKnown RBP20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Noc3lQ8VI84 807 aaKnown RBP20.22■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Pcmtd1P59913 357 aa20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Pof1bQ8K4L4 587 aa20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 NalcnQ8BXR5 1738 aa20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Ints3Q7TPD0 1041 aaKnown RBP20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Dennd6aQ8BH65 605 aa20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Myo5bP21271 1818 aa20.21■□□□□ 0.83
Lsm1-201ENSMUST00000038421 Gm21190A0A0G2JGJ6 266 aa20.2■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Cyp2d12Q8BVD2 504 aa20.2■□□□□ 0.82
Lsm1-201ENSMUST00000038421 RictorQ6QI06 1708 aa20.2■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Bms1Q6PGF5 1284 aaKnown RBP20.2■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Map2P20357 1828 aa20.2■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Slit2Q9R1B9 1521 aa20.19■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Znf335A2A5K6 1337 aa20.19■□□□□ 0.82
Lsm1-201ENSMUST00000038421 N4bp2F8VQG7 1678 aaKnown RBP20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 NcapgE9PWG6 1004 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Gjb2Q00977 226 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Ubr1O70481 1757 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Ier5O89113 308 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Slc4a10Q5DTL9 1118 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Samm50Q8BGH2 469 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Sirt1Q923E4 737 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Nlgn1Q99K10 843 aa20.18■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Rad50P70388 1312 aa20.17■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Atf5O70191 283 aa20.17■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Bach2P97303 839 aa20.17■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Cyp2d11P24457 504 aa20.17■□□□□ 0.82
Lsm1-201ENSMUST00000038421 EappQ5BU09 281 aa20.17■□□□□ 0.82
Lsm1-201ENSMUST00000038421 Camta1A2A891 1682 aa20.17■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms