RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Cluap1Q8R3P7 413 aa16.47■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 1700010I14RikQ7TPG0 532 aa16.46■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Stk31Q99MW1 1018 aa16.46■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Parp14Q2EMV9 1817 aa16.46■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Brinp3Q499E0 766 aa16.46■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Atf3Q60765 181 aa16.46■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Wdr63B2RY71 923 aa16.45■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Stk36Q69ZM6 1316 aa16.45■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Eif4a2P10630 407 aa16.44■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Kif2cQ922S8 721 aa16.44■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 FocadA2AKG8 1798 aa16.44■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Spryd3E9Q9B3 442 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Farp2Q91VS8 1065 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Ncoa4Q5U4H9 625 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Tpm2P58774 284 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Trim27Q62158 513 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 PogkQ80TC5 607 aa16.43■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Ubr2Q6WKZ8 1755 aa16.42■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Bcl9lQ67FY2 1494 aa16.42■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 AU019823E9PUQ3 292 aa16.42■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Tnks1bp1P58871 1720 aa16.42■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Tnpo1Q8BFY9 898 aaKnown RBP16.42■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Speer4f2E9Q366 295 aa16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Morc2aQ69ZX6 1030 aa16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Paxip1Q6NZQ4 1056 aa16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Terf2O35144 541 aa16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Rrp12Q6P5B0 1295 aaKnown RBP16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Abca15E9PWH4 1668 aa16.41■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Znf330Q922H9 316 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Eif4g2Q62448 906 aaKnown RBP16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Dennd6aQ8BH65 605 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Slc35g1Q8BY79 368 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Nlgn1Q99K10 843 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Gtpbp6Q3U6U5 514 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Gimap6Q8K349 305 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 Atg3Q9CPX6 314 aa16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 CarsQ9ER72 831 aaKnown RBP16.4■□□□□ 0.22
Prpf38b-201ENSMUST00000029480 1700017N19RikA0A087WPJ1 469 aa16.38■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Gsdma3Q5Y4Y6 464 aa16.38■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Foxp4Q9DBY0 795 aaKnown RBP16.38■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Rsph3aQ3UFY4 516 aa16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Fbxo2Q80UW2 297 aa16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Clcn1Q64347 994 aa16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Mfap1aC0HKD8 439 aaKnown RBP16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Mfap1bC0HKD9 439 aaKnown RBP16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Fyb1O35601 819 aa16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Shank2Q80Z38 1476 aa16.37■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Atf5O70191 283 aa16.36■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Marf1Q8BJ34 1730 aaKnown RBP16.36■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Pnpla7A2AJ88 1352 aa16.36■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Mrps27Q8BK72 415 aaKnown RBP16.35■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Sh3bp5Q9Z131 463 aa16.35■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Atp10bB1AWN4 1474 aa16.35■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Birc3O08863 600 aa16.35■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Usp16Q99LG0 825 aa16.34■□□□□ 0.21
Prpf38b-201ENSMUST00000029480 Cnksr1A2A9K7 700 aa16.33■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Anapc15P60007 132 aa16.33■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Nol8Q3UHX0 1147 aaKnown RBP16.33■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Nutm1Q8BHP2 1126 aa16.33■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Senp3Q9EP97 568 aaKnown RBP16.33■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Gm21190A0A0G2JGJ6 266 aa16.32■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 GnpatP98192 678 aa16.32■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Amotl1Q9D4H4 968 aa16.32■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Kcnh5Q920E3 988 aa16.31■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Ric1Q69ZJ7 1422 aa16.31■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Slit1Q80TR4 1531 aa16.31■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 E2f4Q8R0K9 410 aa16.31■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Arhgap4B1AUY3 965 aa16.3■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Ric3Q8BPM6 367 aa16.3■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 TmpoQ61033 693 aaKnown RBP16.3■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Arid3aQ62431 601 aa16.3■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Tjp1P39447 1745 aaKnown RBP16.3■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 HypkQ9CR41 129 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Simc1E9Q6E9 1354 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Nckap5lQ6GQX2 1323 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Nucb1Q02819 459 aaKnown RBP16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Aplp1Q03157 653 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Tbc1d9Q3UYK3 1264 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Fam13aQ8BGI4 693 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Cabp2Q9JLK4 216 aa16.29■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 EngaseQ8BX80 734 aa16.28■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Cog6Q8R3I3 657 aa16.28■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Nectin2P32507 530 aa16.28■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Pde3bQ61409 1100 aa16.28■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Catsper2A2ARP9 588 aa16.27■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 TnrQ8BYI9 1358 aa16.27■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Gys2Q8VCB3 704 aa16.27■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Cabp4Q8VHC5 271 aa16.27■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Glipr1l2Q9CQ35 332 aa16.27■□□□□ 0.2
Prpf38b-201ENSMUST00000029480 Brpf1B2RRD7 1212 aa16.27■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Ddx60E9PZQ1 1711 aa16.26■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Cadps2Q8BYR5 1297 aa16.26■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Tmem119Q8R138 280 aa16.26■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Ppp6r3Q922D4 844 aa16.26■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Hoxc9P09633 260 aa16.25■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Tmco5bQ80X59 307 aa16.25■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Dixdc1Q80Y83 711 aa16.25■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 PappaQ8R4K8 1624 aa16.25■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 MycnP03966 462 aaKnown RBP16.25■□□□□ 0.19
Prpf38b-201ENSMUST00000029480 Dzip1Q8BMD2 852 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms