RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dnajc5gQ8C632 165 aa22.94■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 CalcaP70160 136 aa22.93■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Atp8b2P98199 1209 aa22.93■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Rad17Q6NXW6 688 aa22.93■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 PtmsQ9D0J8 101 aaKnown RBP22.93■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Nol8Q3UHX0 1147 aaKnown RBP22.93■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Pnpla7A2AJ88 1352 aa22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Atf5O70191 283 aa22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Prune1Q8BIW1 454 aa22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Trim44Q9QXA7 346 aa22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Rrp9Q91WM3 475 aaKnown RBP22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Disp3A3KFU9 1347 aa22.92■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.91■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Vwa3bJ9JI28 736 aa22.91■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Hoxc9P09633 260 aa22.91■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Hmox1P14901 289 aa22.91■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Gdpd2Q9ESM6 539 aa22.91■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 HypkQ9CR41 129 aa22.9■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Dlg5E9Q9R9 1921 aa22.9■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Vsig10D3YX43 558 aa22.89■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 LlphQ9D945 130 aaKnown RBP22.89■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Cyp2d12Q8BVD2 504 aa22.88■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Chpf2Q3UU43 768 aa22.87■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 NexnQ7TPW1 607 aa22.87■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Mcmdc2E9Q956 681 aa22.87■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Cwc27Q3TKY6 469 aa22.87■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Noc3lQ8VI84 807 aaKnown RBP22.86■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Gm10563F6WIE4 79 aa22.85■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Anapc15P60007 132 aa22.85■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 AnlnQ8K298 1121 aaKnown RBP22.85■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Hoxa7P02830 229 aa22.85■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 MccE9PWI3 1003 aa22.84■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Gm9992B2RWK3 458 aa22.84■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Unc93aQ710D3 458 aa22.84■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Gm45015A0A140LII9 184 aa22.83■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Gm18336A0A140LIU8 765 aa22.83■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Hsp90b1P08113 802 aaKnown RBP22.83■■□□□ 1.25
Shkbp1-201ENSMUST00000003857 Alpk3Q924C5 1678 aa22.83■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 4931400O07RikQ9D4M5 137 aa22.83■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Cyp2d11P24457 504 aa22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Rrp12Q6P5B0 1295 aaKnown RBP22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Ano8Q6PB70 1060 aa22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Tpx2A2APB8 745 aaKnown RBP22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Mum1Q6DID5 682 aa22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Safb2Q80YR5 991 aaKnown RBP22.82■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Nup153E9Q3G8 1462 aaKnown RBP22.81■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Tmem132eQ6IEE6 982 aa22.81■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Ddrgk1Q80WW9 315 aa22.81■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Robo1O89026 1612 aa22.8■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Lmtk3Q5XJV6 1424 aa22.8■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Scaf1Q5U4C3 1256 aaKnown RBP22.8■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Gsdma3Q5Y4Y6 464 aa22.8■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Cnksr1A2A9K7 700 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Filip1lQ6P6L0 1131 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Phactr2B1AVP0 632 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Tnnt1O88346 262 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 PtmaP26350 111 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Atp6v1dP57746 247 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 CoilQ5SU73 570 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Tshz3Q8CGV9 1081 aa22.79■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Ier5O89113 308 aa22.78■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 EvcP57680 1005 aa22.78■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Nol11Q8BJW5 723 aaKnown RBP22.78■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Unc5clQ6R653 518 aa22.77■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Slc35g1Q8BY79 368 aa22.77■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 Pmfbp1Q9WVQ0 1022 aa22.77■■□□□ 1.24
Shkbp1-201ENSMUST00000003857 BcorQ8CGN4 1759 aa22.76■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Ccdc7Q9D541 371 aa22.76■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 C3P01027 1663 aa22.76■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Dhx16G3X8X0 1044 aaKnown RBP22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Smarce1O54941 411 aaKnown RBP22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Ms4a2P20490 235 aa22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Gadd45bP22339 160 aa22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 St18Q80TY4 1045 aa22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Amotl1Q9D4H4 968 aa22.75■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 KinQ8K339 391 aa22.74■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 PogkQ80TC5 607 aa22.74■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Jakmip1Q8BVL9 626 aa22.74■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Atg3Q9CPX6 314 aa22.74■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Nfat5Q9WV30 1534 aa22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Eif4a1P60843 406 aaKnown RBP22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Utp18Q5SSI6 552 aaKnown RBP22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Pdzrn3Q69ZS0 1063 aa22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Chmp4cQ9D7F7 232 aa22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Kdm6aO70546 1401 aa22.73■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Syce3B5KM66 88 aa22.72■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Tmem94Q7TSH8 1360 aa22.72■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Glipr1l2Q9CQ35 332 aa22.72■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Nid2O88322 1403 aa22.72■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Strn4P58404 760 aa22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Ddx19aQ61655 478 aaKnown RBP22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Abcc12Q80WJ6 1366 aa22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Rad50P70388 1312 aa22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Fyb1O35601 819 aa22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Cct4P80315 539 aaKnown RBP22.71■■□□□ 1.23
Shkbp1-201ENSMUST00000003857 Tlr7P58681 1050 aa22.7■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Bend3Q6PAL0 825 aa22.7■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Amotl2Q8K371 772 aa22.7■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Erich6bQ9D4S6 220 aa22.7■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Kif4P33174 1231 aa22.69■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms