Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 UPK3BP1-201ENST00000428678 509 ntBASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 AL671277.2-201ENST00000458060 996 ntBASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 SDHAP1-207ENST00000440850 2000 ntBASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.69□□□□□ -0.06
TSSC4Q9Y5U2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 AP000550.4-202ENST00000639755 178 ntBASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.68□□□□□ -0.06
TSSC4Q9Y5U2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TSSC4Q9Y5U2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AC112907.3-201ENST00000577781 2400 ntBASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms