Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 KSR1P1-201ENST00000446298 240 ntBASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 AC073648.6-201ENST00000641589 218 ntBASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 HTR7P1-201ENST00000538670 1336 ntBASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHA3Q9Y5H8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 AC068880.1-201ENST00000507289 2297 ntBASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 AP002982.1-201ENST00000492365 877 ntBASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA3Q9Y5H8 AL357033.4-201ENST00000617703 1807 ntBASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 PCDHB18P-201ENST00000524813 2368 ntBASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHA3Q9Y5H8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 AC006058.3-201ENST00000606217 1069 ntBASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHA3Q9Y5H8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms