Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1Q9Y2A7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 TEX21P-204ENST00000641479 1693 ntBASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1Q9Y2A7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 RCC2P3-201ENST00000418112 1537 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AL109659.2-201ENST00000606809 1674 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 HCG11-201ENST00000411553 5696 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AL645929.1-201ENST00000420084 975 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AC092597.1-201ENST00000487352 616 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 AL512353.2-201ENST00000448759 1962 ntBASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NCKAP1Q9Y2A7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 SEC1P-202ENST00000473944 940 ntBASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 KRT8P7-201ENST00000533003 1432 ntBASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 FEM1AP3-201ENST00000403722 1741 ntBASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKAP1Q9Y2A7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKAP1Q9Y2A7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms