Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.49■□□□□ 0.71
AP4E1Q9UPM8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4E1Q9UPM8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 GPAT2P1-201ENST00000444924 1672 ntBASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4E1Q9UPM8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL023284.2-201ENST00000405850 579 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 SLC25A1P2-201ENST00000430693 912 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 WIZP1-201ENST00000531444 2299 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL357033.4-201ENST00000617703 1807 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AL109659.2-201ENST00000606809 1674 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AC008556.1-201ENST00000610908 2040 ntBASIC19.46■□□□□ 0.71
AP4E1Q9UPM8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 C2orf69P3-201ENST00000565542 1120 ntBASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 AL023803.3-201ENST00000615559 522 ntBASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms