Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 LINC01023-201ENST00000606054 436 ntBASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA4Q9UN74 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA4Q9UN74 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 AL138781.2-201ENST00000617896 1843 ntBASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 ECEL1P3-201ENST00000427961 737 ntBASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 AL512604.3-201ENST00000569583 964 ntBASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA4Q9UN74 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.4■■□□□ 1.02
PCDHA4Q9UN74 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms