Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 SLC25A3P1-201ENST00000443844 931 ntBASIC21.77■■□□□ 1.08
RBM28Q9NW13 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 KRT8P45-201ENST00000414328 1447 ntBASIC21.77■■□□□ 1.08
RBM28Q9NW13 AC036111.1-201ENST00000533973 1582 ntBASIC21.77■■□□□ 1.08
RBM28Q9NW13 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBM28Q9NW13 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RBM28Q9NW13 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RBM28Q9NW13 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RBM28Q9NW13 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBM28Q9NW13 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AC093503.3-201ENST00000624917 2352 ntBASIC21.75■■□□□ 1.07
RBM28Q9NW13 ANO7L1-203ENST00000602586 1720 ntBASIC21.75■■□□□ 1.07
RBM28Q9NW13 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RBM28Q9NW13 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.75■■□□□ 1.07
RBM28Q9NW13 AC120498.9-201ENST00000339021 3867 ntBASIC21.75■■□□□ 1.07
RBM28Q9NW13 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 AC005363.2-201ENST00000618631 242 ntBASIC21.74■■□□□ 1.07
RBM28Q9NW13 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBM28Q9NW13 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RBM28Q9NW13 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RBM28Q9NW13 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RBM28Q9NW13 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms