Protein–RNA interactions for Protein: Q9NR55

BATF3, Basic leucine zipper transcriptional factor ATF-like 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BATF3Q9NR55 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.58■□□□□ 0.4
BATF3Q9NR55 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.58■□□□□ 0.4
BATF3Q9NR55 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BATF3Q9NR55 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BATF3Q9NR55 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BATF3Q9NR55 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.58■□□□□ 0.4
BATF3Q9NR55 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BATF3Q9NR55 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BATF3Q9NR55 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.56■□□□□ 0.4
BATF3Q9NR55 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BATF3Q9NR55 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
BATF3Q9NR55 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BATF3Q9NR55 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms