Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 AC098934.4-201ENST00000564127 592 ntBASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRCC1Q9NPI7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 MIR935-201ENST00000401179 91 ntBASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 MYC-208ENST00000641036 567 ntBASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRCC1Q9NPI7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 BICD1-207ENST00000551848 1962 ntBASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 NFIC-211ENST00000641145 8399 ntBASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 KRT17P3-201ENST00000420566 1262 ntBASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 UNC93B5-201ENST00000530315 699 ntBASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.24■□□□□ 0.35
KRCC1Q9NPI7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms