Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 IRX1P1-201ENST00000438849 1838 ntBASIC21.88■■□□□ 1.09
SH2D4AQ9H788 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 SPDYE13P-201ENST00000445314 798 ntBASIC21.88■■□□□ 1.09
SH2D4AQ9H788 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 FP475955.4-201ENST00000623131 1990 ntBASIC21.87■■□□□ 1.09
SH2D4AQ9H788 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 AC092597.1-201ENST00000487352 616 ntBASIC21.87■■□□□ 1.09
SH2D4AQ9H788 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 MIR3917-201ENST00000580971 93 ntBASIC21.87■■□□□ 1.09
SH2D4AQ9H788 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 HOXB1-202ENST00000577092 1414 ntBASIC21.87■■□□□ 1.09
SH2D4AQ9H788 AC141586.3-201ENST00000562166 1838 ntBASIC21.87■■□□□ 1.09
SH2D4AQ9H788 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH2D4AQ9H788 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 AC008556.1-201ENST00000610908 2040 ntBASIC21.86■■□□□ 1.09
SH2D4AQ9H788 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 KRT18P23-201ENST00000435622 1283 ntBASIC21.86■■□□□ 1.09
SH2D4AQ9H788 HCG4P8-203ENST00000443049 980 ntBASIC21.86■■□□□ 1.09
SH2D4AQ9H788 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.86■■□□□ 1.09
SH2D4AQ9H788 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH2D4AQ9H788 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 KRT8P32-201ENST00000512863 1461 ntBASIC21.85■■□□□ 1.09
SH2D4AQ9H788 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.85■■□□□ 1.09
SH2D4AQ9H788 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SH2D4AQ9H788 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms