Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
EBF4Q9BQW3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 RCC2P6-201ENST00000526625 1557 ntBASIC18.3■□□□□ 0.52
EBF4Q9BQW3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 MIPEPP3-201ENST00000412105 444 ntBASIC18.3■□□□□ 0.52
EBF4Q9BQW3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
EBF4Q9BQW3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 GNAS-203ENST00000306120 1878 ntBASIC18.29■□□□□ 0.52
EBF4Q9BQW3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF4Q9BQW3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AC091874.3-201ENST00000512672 1195 ntBASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AC092368.3-202ENST00000574180 1591 ntBASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AC093677.2-201ENST00000600169 1863 ntBASIC18.28■□□□□ 0.52
EBF4Q9BQW3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms