Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AP003733.1-201ENST00000491725 852 ntBASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AL662844.1-201ENST00000546340 181 ntBASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AC074051.2-201ENST00000565115 352 ntBASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 AC010240.3-201ENST00000607688 395 ntBASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNRNP40Q96DI7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 KRT8P7-201ENST00000533003 1432 ntBASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AC104390.1-201ENST00000555663 520 ntBASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AL121912.1-201ENST00000603683 238 ntBASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 AL109659.2-201ENST00000606809 1674 ntBASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
SNRNP40Q96DI7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 AL353801.3-201ENST00000609898 542 ntBASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRNP40Q96DI7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms