Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 UNC93B5-201ENST00000530315 699 ntBASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC44A1Q8WWI5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 AC142086.2-201ENST00000569753 217 ntBASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 AC008403.3-201ENST00000598924 454 ntBASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC44A1Q8WWI5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 KRT8P11-201ENST00000409686 1436 ntBASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC44A1Q8WWI5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 AC104771.1-201ENST00000603335 964 ntBASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 AL109923.1-201ENST00000618799 583 ntBASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 AC135776.1-201ENST00000319817 2481 ntBASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC44A1Q8WWI5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 MTDHP1-201ENST00000605323 784 ntBASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 MYC-208ENST00000641036 567 ntBASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms