Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KRT8P3-201ENST00000519669 1449 ntBASIC19.02■□□□□ 0.64
PTCD2Q8WV60 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 INGX-201ENST00000359239 846 ntBASIC19.02■□□□□ 0.64
PTCD2Q8WV60 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 CRYGFP-201ENST00000418459 633 ntBASIC19.02■□□□□ 0.64
PTCD2Q8WV60 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 KRT18P21-201ENST00000515767 1272 ntBASIC19.02■□□□□ 0.64
PTCD2Q8WV60 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 AP000692.2-201ENST00000608391 879 ntBASIC19.02■□□□□ 0.64
PTCD2Q8WV60 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.02■□□□□ 0.64
PTCD2Q8WV60 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTCD2Q8WV60 ANO7L1-203ENST00000602586 1720 ntBASIC19.02■□□□□ 0.63
PTCD2Q8WV60 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.02■□□□□ 0.63
PTCD2Q8WV60 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PTCD2Q8WV60 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTCD2Q8WV60 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 HEIH-201ENST00000623091 1652 ntBASIC19.01■□□□□ 0.63
PTCD2Q8WV60 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 SLC25A1P4-201ENST00000567977 778 ntBASIC19.01■□□□□ 0.63
PTCD2Q8WV60 AKR1B10P2-201ENST00000577332 927 ntBASIC19.01■□□□□ 0.63
PTCD2Q8WV60 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.01■□□□□ 0.63
PTCD2Q8WV60 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PTCD2Q8WV60 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 FAM207BP-201ENST00000447172 505 ntBASIC19■□□□□ 0.63
PTCD2Q8WV60 DGCR10-201ENST00000609839 495 ntBASIC19■□□□□ 0.63
PTCD2Q8WV60 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19■□□□□ 0.63
PTCD2Q8WV60 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCD2Q8WV60 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19■□□□□ 0.63
PTCD2Q8WV60 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 RCN1P1-201ENST00000400413 996 ntBASIC18.99■□□□□ 0.63
PTCD2Q8WV60 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms