Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 AC093503.3-201ENST00000624917 2352 ntBASIC19.88■□□□□ 0.77
UBA3Q8TBC4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 AC010653.2-201ENST00000623505 997 ntBASIC19.88■□□□□ 0.77
UBA3Q8TBC4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 AC097493.4-201ENST00000641197 219 ntBASIC19.88■□□□□ 0.77
UBA3Q8TBC4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
UBA3Q8TBC4 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.87■□□□□ 0.77
UBA3Q8TBC4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 MCCD1P1-208ENST00000445732 328 ntBASIC19.87■□□□□ 0.77
UBA3Q8TBC4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBA3Q8TBC4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 KRT8P45-201ENST00000414328 1447 ntBASIC19.86■□□□□ 0.77
UBA3Q8TBC4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 MTMR9LP-203ENST00000426597 1545 ntBASIC19.86■□□□□ 0.77
UBA3Q8TBC4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBA3Q8TBC4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 LINC01023-201ENST00000606054 436 ntBASIC19.85■□□□□ 0.77
UBA3Q8TBC4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.85■□□□□ 0.77
UBA3Q8TBC4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
UBA3Q8TBC4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 AL109659.2-201ENST00000606809 1674 ntBASIC19.84■□□□□ 0.77
UBA3Q8TBC4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 AL357033.4-201ENST00000617703 1807 ntBASIC19.84■□□□□ 0.77
UBA3Q8TBC4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.84■□□□□ 0.77
UBA3Q8TBC4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.84■□□□□ 0.77
UBA3Q8TBC4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms