Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KRT8P32-201ENST00000512863 1461 ntBASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 AC008556.1-201ENST00000610908 2040 ntBASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NKX2-3Q8TAU0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TSPY17P-201ENST00000450329 467 ntBASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 AC005332.1-201ENST00000577698 1310 ntBASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NKX2-3Q8TAU0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 MTMR9LP-203ENST00000426597 1545 ntBASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 CR769767.2-201ENST00000622735 460 ntBASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 AC068587.9-201ENST00000641814 219 ntBASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NKX2-3Q8TAU0 CROCCP3-202ENST00000420820 1947 ntBASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 RCC2P3-201ENST00000418112 1537 ntBASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.21■■□□□ 1.15
NKX2-3Q8TAU0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
NKX2-3Q8TAU0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NKX2-3Q8TAU0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
NKX2-3Q8TAU0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NKX2-3Q8TAU0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NKX2-3Q8TAU0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NKX2-3Q8TAU0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NKX2-3Q8TAU0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms