Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AL390955.1-201ENST00000428694 934 ntBASIC15.22■□□□□ 0.03
LINC00311Q8N616 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AC093827.2-201ENST00000512654 315 ntBASIC15.22■□□□□ 0.03
LINC00311Q8N616 EGLN1P1-201ENST00000531623 762 ntBASIC15.22■□□□□ 0.03
LINC00311Q8N616 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 AP000593.1-201ENST00000393668 712 ntBASIC15.21■□□□□ 0.03
LINC00311Q8N616 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 AP003041.3-201ENST00000527151 707 ntBASIC15.21■□□□□ 0.03
LINC00311Q8N616 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 BX088651.1-201ENST00000540551 451 ntBASIC15.21■□□□□ 0.03
LINC00311Q8N616 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC00311Q8N616 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 AC066615.1-201ENST00000640911 628 ntBASIC15.21■□□□□ 0.03
LINC00311Q8N616 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00311Q8N616 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00311Q8N616 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00311Q8N616 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.21■□□□□ 0.02
LINC00311Q8N616 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00311Q8N616 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LINC00311Q8N616 AC034236.2-201ENST00000606662 1610 ntBASIC15.21■□□□□ 0.02
LINC00311Q8N616 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 MMP23A-201ENST00000234610 1017 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 AL596275.1-201ENST00000423464 877 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 AC007663.1-201ENST00000438948 1240 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 AC128688.1-201ENST00000487626 519 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 WWOX-216ENST00000569818 525 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 MIR4674-201ENST00000582457 87 ntBASIC15.2■□□□□ 0.02
LINC00311Q8N616 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00311Q8N616 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00311Q8N616 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms