Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 AC005829.2-201ENST00000571422 1056 ntBASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 FAM197Y4-202ENST00000622692 608 ntBASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 ANO7L1-203ENST00000602586 1720 ntBASIC17.47■□□□□ 0.39
DEPDC4Q8N2C3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC104417.2-201ENST00000562989 1793 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 POM121L13P-201ENST00000422362 380 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AC008403.3-201ENST00000598924 454 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 AP000997.3-201ENST00000623333 2250 ntBASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
DEPDC4Q8N2C3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
DEPDC4Q8N2C3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.46■□□□□ 0.38
DEPDC4Q8N2C3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 SDHAP1-207ENST00000440850 2000 ntBASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DEPDC4Q8N2C3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DEPDC4Q8N2C3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms