Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 SLC29A4P1-201ENST00000398760 971 ntBASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 AL355802.2-201ENST00000402069 882 ntBASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 TUBB8P6-201ENST00000436895 1288 ntBASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 AC126763.1-201ENST00000552015 2118 ntBASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM42Q8IWZ5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 KRT18P16-201ENST00000510337 1294 ntBASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM42Q8IWZ5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 AC008764.6-201ENST00000595909 2069 ntBASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 GUSBP6-202ENST00000438529 1198 ntBASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM42Q8IWZ5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms