Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF546Q86UE3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 SUDS3P1-201ENST00000505831 966 ntBASIC15.62■□□□□ 0.09
ZNF546Q86UE3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 OR6D1P-203ENST00000641209 4860 ntBASIC15.62■□□□□ 0.09
ZNF546Q86UE3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ZNF546Q86UE3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms