Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 AL160286.2-201ENST00000567150 934 ntBASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 C1QL1P1-201ENST00000568105 661 ntBASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 Z98044.1-201ENST00000632503 1764 ntBASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
MRPL55Q7Z7F7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 AC026366.1-201ENST00000488803 879 ntBASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 AC069544.1-201ENST00000609399 999 ntBASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms