Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1AQ71U36 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 AL158047.1-201ENST00000445918 881 ntBASIC17.32■□□□□ 0.36
TUBA1AQ71U36 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 MTDHP1-201ENST00000605323 784 ntBASIC17.32■□□□□ 0.36
TUBA1AQ71U36 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1AQ71U36 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC139713.2-201ENST00000641328 2723 ntBASIC17.31■□□□□ 0.36
TUBA1AQ71U36 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 PHGDH-210ENST00000641115 1638 ntBASIC17.31■□□□□ 0.36
TUBA1AQ71U36 FP475955.4-201ENST00000623131 1990 ntBASIC17.31■□□□□ 0.36
TUBA1AQ71U36 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 AC018553.1-201ENST00000616682 1458 ntBASIC17.31■□□□□ 0.36
TUBA1AQ71U36 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBA1AQ71U36 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 AC142381.4-202ENST00000563973 229 ntBASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 RN7SL471P-201ENST00000580476 299 ntBASIC17.3■□□□□ 0.36
TUBA1AQ71U36 AL121906.2-201ENST00000621597 723 ntBASIC17.3■□□□□ 0.36
TUBA1AQ71U36 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms