Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 C9orf163-202ENST00000624034 2573 ntBASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 SPCS2P1-201ENST00000561636 679 ntBASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 MIR1199-201ENST00000621445 119 ntBASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 AL049796.1-201ENST00000565336 1766 ntBASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.34■□□□□ 0.85
CHRDL2Q6WN34 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.33■□□□□ 0.85
CHRDL2Q6WN34 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 HLA-J-201ENST00000462773 1622 ntBASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRDL2Q6WN34 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 RPS6P14-201ENST00000425165 719 ntBASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 AC007967.2-201ENST00000432613 625 ntBASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRDL2Q6WN34 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 RPS2P1-201ENST00000434010 821 ntBASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 TREX1-205ENST00000625293 1783 ntBASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRDL2Q6WN34 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 RBM17P3-201ENST00000417687 1192 ntBASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 AL353718.1-201ENST00000451028 517 ntBASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRDL2Q6WN34 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms