Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 AL138781.2-201ENST00000617896 1843 ntBASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.88■□□□□ 0.29
NHLRC1Q6VVB1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 DGCR10-201ENST00000609839 495 ntBASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 AC026471.5-201ENST00000615068 467 ntBASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NHLRC1Q6VVB1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms