Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 RASA4DP-201ENST00000460726 1199 ntBASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 FAM86EP-206ENST00000510506 987 ntBASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SWSAP1Q6NVH7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 KRT18P23-201ENST00000435622 1283 ntBASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 AL121956.5-201ENST00000625261 221 ntBASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SWSAP1Q6NVH7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SWSAP1Q6NVH7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SWSAP1Q6NVH7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 LINC01311-201ENST00000565162 1445 ntBASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms