Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC211429.1-201ENST00000415277 523 ntBASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC007663.1-201ENST00000438948 1240 ntBASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 LINC01023-201ENST00000606054 436 ntBASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.69■□□□□ 0.58
LDLRAP1Q5SW96 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 AC012306.2-201ENST00000609350 630 ntBASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDLRAP1Q5SW96 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AP003041.3-201ENST00000527151 707 ntBASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AL049812.1-201ENST00000432563 2267 ntBASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDLRAP1Q5SW96 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 AL512353.2-201ENST00000448759 1962 ntBASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDLRAP1Q5SW96 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms