Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 MIR3917-201ENST00000580971 93 ntBASIC19.9■□□□□ 0.78
VARS2Q5ST30 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
VARS2Q5ST30 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
VARS2Q5ST30 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 DUSP5P1-201ENST00000441325 1139 ntBASIC19.89■□□□□ 0.77
VARS2Q5ST30 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 AC079602.3-201ENST00000623931 403 ntBASIC19.89■□□□□ 0.77
VARS2Q5ST30 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARS2Q5ST30 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VARS2Q5ST30 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 KRT8P7-201ENST00000533003 1432 ntBASIC19.88■□□□□ 0.77
VARS2Q5ST30 HOXB1-202ENST00000577092 1414 ntBASIC19.88■□□□□ 0.77
VARS2Q5ST30 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARS2Q5ST30 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
VARS2Q5ST30 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.87■□□□□ 0.77
VARS2Q5ST30 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARS2Q5ST30 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 HCG4P8-203ENST00000443049 980 ntBASIC19.86■□□□□ 0.77
VARS2Q5ST30 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 AC104390.1-201ENST00000555663 520 ntBASIC19.86■□□□□ 0.77
VARS2Q5ST30 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARS2Q5ST30 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VARS2Q5ST30 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms