Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 AP000692.2-201ENST00000608391 879 ntBASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP13A4Q4VNC1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP13A4Q4VNC1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 AC116562.2-201ENST00000507042 360 ntBASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 AC008622.2-201ENST00000617006 1229 ntBASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 AL135905.2-201ENST00000584934 1404 ntBASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP13A4Q4VNC1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 NUDT16P1-203ENST00000513809 620 ntBASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 AC233702.5-201ENST00000584107 538 ntBASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 AC135050.7-201ENST00000624508 2218 ntBASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 AL357033.4-201ENST00000617703 1807 ntBASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ATP13A4Q4VNC1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms