Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL20P78556 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL20P78556 AC023632.3-201ENST00000521633 145 ntBASIC14.81□□□□□ -0.04
CCL20P78556 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL20P78556 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
CCL20P78556 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL20P78556 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCL20P78556 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL20P78556 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCL20P78556 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL20P78556 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCL20P78556 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 TFP1-202ENST00000475455 1573 ntBASIC14.81□□□□□ -0.04
CCL20P78556 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.8□□□□□ -0.04
CCL20P78556 AC093677.2-201ENST00000600169 1863 ntBASIC14.8□□□□□ -0.04
CCL20P78556 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL20P78556 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCL20P78556 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.8□□□□□ -0.04
CCL20P78556 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 MFSD11-216ENST00000590393 1141 ntBASIC14.8□□□□□ -0.04
CCL20P78556 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL20P78556 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.8□□□□□ -0.04
CCL20P78556 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL20P78556 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCL20P78556 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 AL118508.1-201ENST00000613502 2345 ntBASIC14.8□□□□□ -0.04
CCL20P78556 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CCL20P78556 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.8□□□□□ -0.04
CCL20P78556 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCL20P78556 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL20P78556 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL20P78556 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CCL20P78556 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 AL136116.3-201ENST00000402907 1138 ntBASIC14.79□□□□□ -0.04
CCL20P78556 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.79□□□□□ -0.04
CCL20P78556 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL20P78556 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL20P78556 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 AL591742.1-201ENST00000604433 565 ntBASIC14.79□□□□□ -0.04
CCL20P78556 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL20P78556 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL20P78556 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL20P78556 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL20P78556 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL20P78556 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms