Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
IRX4P78413 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.51■□□□□ 0.71
IRX4P78413 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 B3GAT3P1-201ENST00000471720 806 ntBASIC19.51■□□□□ 0.71
IRX4P78413 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 AL445675.2-201ENST00000620291 557 ntBASIC19.51■□□□□ 0.71
IRX4P78413 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.51■□□□□ 0.71
IRX4P78413 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.51■□□□□ 0.71
IRX4P78413 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
IRX4P78413 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.51■□□□□ 0.71
IRX4P78413 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
IRX4P78413 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
IRX4P78413 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
IRX4P78413 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.5■□□□□ 0.71
IRX4P78413 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
IRX4P78413 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.5■□□□□ 0.71
IRX4P78413 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.5■□□□□ 0.71
IRX4P78413 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.5■□□□□ 0.71
IRX4P78413 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 AC026271.3-201ENST00000571884 352 ntBASIC19.5■□□□□ 0.71
IRX4P78413 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.5■□□□□ 0.71
IRX4P78413 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IRX4P78413 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.5■□□□□ 0.71
IRX4P78413 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
IRX4P78413 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.5■□□□□ 0.71
IRX4P78413 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IRX4P78413 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.49■□□□□ 0.71
IRX4P78413 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX4P78413 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
IRX4P78413 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX4P78413 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 AC117947.1-201ENST00000427448 529 ntBASIC19.49■□□□□ 0.71
IRX4P78413 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX4P78413 C1QL1P1-201ENST00000568105 661 ntBASIC19.49■□□□□ 0.71
IRX4P78413 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.49■□□□□ 0.71
IRX4P78413 DGCR10-201ENST00000609839 495 ntBASIC19.49■□□□□ 0.71
IRX4P78413 FAM87A-204ENST00000613235 858 ntBASIC19.49■□□□□ 0.71
IRX4P78413 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 PHGDH-210ENST00000641115 1638 ntBASIC19.49■□□□□ 0.71
IRX4P78413 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms