Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.38□□□□□ -0.27
UBE2D3P61077 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.38□□□□□ -0.27
UBE2D3P61077 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.38□□□□□ -0.27
UBE2D3P61077 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
UBE2D3P61077 AP003097.1-201ENST00000530657 1135 ntBASIC13.38□□□□□ -0.27
UBE2D3P61077 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.38□□□□□ -0.27
UBE2D3P61077 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.38□□□□□ -0.27
UBE2D3P61077 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 HLA-A-209ENST00000638375 975 ntBASIC13.38□□□□□ -0.27
UBE2D3P61077 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
UBE2D3P61077 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBE2D3P61077 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.38□□□□□ -0.27
UBE2D3P61077 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBE2D3P61077 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBE2D3P61077 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UBE2D3P61077 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBE2D3P61077 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.37□□□□□ -0.27
UBE2D3P61077 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 AC009053.2-201ENST00000563701 2365 ntBASIC13.37□□□□□ -0.27
UBE2D3P61077 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UBE2D3P61077 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UBE2D3P61077 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UBE2D3P61077 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.37□□□□□ -0.27
UBE2D3P61077 KRT17P3-201ENST00000420566 1262 ntBASIC13.37□□□□□ -0.27
UBE2D3P61077 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 AC083906.6-201ENST00000641366 219 ntBASIC13.37□□□□□ -0.27
UBE2D3P61077 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UBE2D3P61077 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 BICD1-207ENST00000551848 1962 ntBASIC13.37□□□□□ -0.27
UBE2D3P61077 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.37□□□□□ -0.27
UBE2D3P61077 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UBE2D3P61077 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2D3P61077 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
UBE2D3P61077 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2D3P61077 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.37□□□□□ -0.27
UBE2D3P61077 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2D3P61077 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
UBE2D3P61077 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
UBE2D3P61077 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 AC090164.3-201ENST00000610780 2143 ntBASIC13.36□□□□□ -0.27
UBE2D3P61077 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2D3P61077 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2D3P61077 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBE2D3P61077 HLA-L-209ENST00000420110 1011 ntBASIC13.36□□□□□ -0.27
UBE2D3P61077 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2D3P61077 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2D3P61077 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.36□□□□□ -0.27
UBE2D3P61077 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2D3P61077 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2D3P61077 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.36□□□□□ -0.27
UBE2D3P61077 MTDHP1-201ENST00000605323 784 ntBASIC13.36□□□□□ -0.27
UBE2D3P61077 AC069544.1-201ENST00000609399 999 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms