Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH8P55286 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH8P55286 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDH8P55286 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.03■□□□□ 0.8
CDH8P55286 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH8P55286 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CDH8P55286 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 FAM210CP-201ENST00000445714 574 ntBASIC20.03■□□□□ 0.8
CDH8P55286 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH8P55286 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH8P55286 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CDH8P55286 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH8P55286 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH8P55286 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDH8P55286 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
CDH8P55286 AL357033.4-201ENST00000617703 1807 ntBASIC20.02■□□□□ 0.8
CDH8P55286 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH8P55286 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
CDH8P55286 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH8P55286 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 MIR3180-5-201ENST00000583743 153 ntBASIC20.02■□□□□ 0.8
CDH8P55286 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH8P55286 AC141257.4-201ENST00000634557 245 ntBASIC20.02■□□□□ 0.8
CDH8P55286 AC136944.6-201ENST00000634818 245 ntBASIC20.02■□□□□ 0.8
CDH8P55286 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH8P55286 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.02■□□□□ 0.8
CDH8P55286 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH8P55286 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH8P55286 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.02■□□□□ 0.79
CDH8P55286 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDH8P55286 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH8P55286 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CDH8P55286 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 BX323043.1-201ENST00000641006 1765 ntBASIC20.01■□□□□ 0.79
CDH8P55286 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.01■□□□□ 0.79
CDH8P55286 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDH8P55286 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH8P55286 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CDH8P55286 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH8P55286 AC009947.2-201ENST00000444014 672 ntBASIC20.01■□□□□ 0.79
CDH8P55286 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH8P55286 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH8P55286 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH8P55286 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CDH8P55286 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDH8P55286 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDH8P55286 AC092865.7-201ENST00000641832 219 ntBASIC20.01■□□□□ 0.79
CDH8P55286 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CDH8P55286 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 CROCCP3-202ENST00000420820 1947 ntBASIC20.01■□□□□ 0.79
CDH8P55286 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH8P55286 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDH8P55286 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDH8P55286 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH8P55286 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20■□□□□ 0.79
CDH8P55286 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20■□□□□ 0.79
CDH8P55286 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20■□□□□ 0.79
CDH8P55286 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20■□□□□ 0.79
CDH8P55286 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20■□□□□ 0.79
CDH8P55286 AC104076.2-201ENST00000448912 469 ntBASIC20■□□□□ 0.79
CDH8P55286 WWOX-216ENST00000569818 525 ntBASIC20■□□□□ 0.79
CDH8P55286 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20■□□□□ 0.79
CDH8P55286 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20■□□□□ 0.79
CDH8P55286 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH8P55286 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms