Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGA8P53708 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
ITGA8P53708 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ITGA8P53708 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ITGA8P53708 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 AC069152.1-201ENST00000438030 544 ntBASIC19.29■□□□□ 0.68
ITGA8P53708 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.29■□□□□ 0.68
ITGA8P53708 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.29■□□□□ 0.68
ITGA8P53708 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ITGA8P53708 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGA8P53708 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ITGA8P53708 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.29■□□□□ 0.68
ITGA8P53708 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.28■□□□□ 0.68
ITGA8P53708 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGA8P53708 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGA8P53708 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGA8P53708 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ITGA8P53708 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGA8P53708 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGA8P53708 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ITGA8P53708 AC133041.1-202ENST00000642053 222 ntBASIC19.28■□□□□ 0.68
ITGA8P53708 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGA8P53708 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGA8P53708 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGA8P53708 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
ITGA8P53708 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
ITGA8P53708 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ITGA8P53708 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ITGA8P53708 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
ITGA8P53708 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.27■□□□□ 0.68
ITGA8P53708 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ITGA8P53708 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.27■□□□□ 0.68
ITGA8P53708 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ITGA8P53708 AC004264.1-201ENST00000608354 794 ntBASIC19.27■□□□□ 0.68
ITGA8P53708 AC068587.9-201ENST00000641814 219 ntBASIC19.27■□□□□ 0.68
ITGA8P53708 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
ITGA8P53708 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.27■□□□□ 0.68
ITGA8P53708 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ITGA8P53708 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGA8P53708 AP000997.3-201ENST00000623333 2250 ntBASIC19.27■□□□□ 0.68
ITGA8P53708 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
ITGA8P53708 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGA8P53708 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGA8P53708 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGA8P53708 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGA8P53708 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGA8P53708 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.27■□□□□ 0.67
ITGA8P53708 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms