Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDK7P50613 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK7P50613 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 AC090616.6-201ENST00000582640 721 ntBASIC20.75■□□□□ 0.91
CDK7P50613 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDK7P50613 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDK7P50613 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 MRPL3P1-201ENST00000400109 1033 ntBASIC20.74■□□□□ 0.91
CDK7P50613 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK7P50613 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK7P50613 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 KRT8P7-201ENST00000533003 1432 ntBASIC20.74■□□□□ 0.91
CDK7P50613 AL662844.1-201ENST00000546340 181 ntBASIC20.74■□□□□ 0.91
CDK7P50613 AC104390.1-201ENST00000555663 520 ntBASIC20.74■□□□□ 0.91
CDK7P50613 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK7P50613 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 AC005332.3-201ENST00000589904 676 ntBASIC20.74■□□□□ 0.91
CDK7P50613 AL121912.1-201ENST00000603683 238 ntBASIC20.74■□□□□ 0.91
CDK7P50613 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK7P50613 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK7P50613 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDK7P50613 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 KRT16P4-201ENST00000453883 522 ntBASIC20.73■□□□□ 0.91
CDK7P50613 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK7P50613 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.73■□□□□ 0.91
CDK7P50613 AC104819.1-201ENST00000504587 486 ntBASIC20.73■□□□□ 0.91
CDK7P50613 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.73■□□□□ 0.91
CDK7P50613 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK7P50613 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDK7P50613 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK7P50613 AL390719.2-201ENST00000606993 987 ntBASIC20.73■□□□□ 0.91
CDK7P50613 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK7P50613 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK7P50613 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK7P50613 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK7P50613 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK7P50613 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK7P50613 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK7P50613 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK7P50613 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CDK7P50613 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CDK7P50613 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.72■□□□□ 0.91
CDK7P50613 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.72■□□□□ 0.91
CDK7P50613 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
CDK7P50613 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
CDK7P50613 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK7P50613 AL109659.2-201ENST00000606809 1674 ntBASIC20.72■□□□□ 0.91
CDK7P50613 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms