Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.41■□□□□ 0.54
RABIFP47224 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.41■□□□□ 0.54
RABIFP47224 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
RABIFP47224 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.41■□□□□ 0.54
RABIFP47224 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.41■□□□□ 0.54
RABIFP47224 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 ATP5G2P1-201ENST00000433580 426 ntBASIC18.41■□□□□ 0.54
RABIFP47224 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.41■□□□□ 0.54
RABIFP47224 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.41■□□□□ 0.54
RABIFP47224 AC011498.5-201ENST00000592027 486 ntBASIC18.41■□□□□ 0.54
RABIFP47224 AC010240.3-201ENST00000607688 395 ntBASIC18.41■□□□□ 0.54
RABIFP47224 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 AC079602.3-201ENST00000623931 403 ntBASIC18.41■□□□□ 0.54
RABIFP47224 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.41■□□□□ 0.54
RABIFP47224 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RABIFP47224 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RABIFP47224 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RABIFP47224 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.4■□□□□ 0.54
RABIFP47224 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.4■□□□□ 0.54
RABIFP47224 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.4■□□□□ 0.54
RABIFP47224 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.4■□□□□ 0.54
RABIFP47224 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.4■□□□□ 0.54
RABIFP47224 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RABIFP47224 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
RABIFP47224 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 AL391807.1-203ENST00000604392 2365 ntBASIC18.4■□□□□ 0.54
RABIFP47224 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.4■□□□□ 0.54
RABIFP47224 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RABIFP47224 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RABIFP47224 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
RABIFP47224 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.39■□□□□ 0.53
RABIFP47224 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
RABIFP47224 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.39■□□□□ 0.53
RABIFP47224 BX276092.5-203ENST00000456199 560 ntBASIC18.39■□□□□ 0.53
RABIFP47224 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.39■□□□□ 0.53
RABIFP47224 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
RABIFP47224 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.39■□□□□ 0.53
RABIFP47224 MIR3180-4-201ENST00000582223 153 ntBASIC18.39■□□□□ 0.53
RABIFP47224 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.39■□□□□ 0.53
RABIFP47224 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RABIFP47224 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.39■□□□□ 0.53
RABIFP47224 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
RABIFP47224 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RABIFP47224 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RABIFP47224 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RABIFP47224 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.38■□□□□ 0.53
RABIFP47224 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.38■□□□□ 0.53
RABIFP47224 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RABIFP47224 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RABIFP47224 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RABIFP47224 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.38■□□□□ 0.53
RABIFP47224 KRT126P-201ENST00000549467 1181 ntBASIC18.38■□□□□ 0.53
RABIFP47224 AL121672.3-201ENST00000608644 468 ntBASIC18.38■□□□□ 0.53
RABIFP47224 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.38■□□□□ 0.53
RABIFP47224 AC068587.9-201ENST00000641814 219 ntBASIC18.38■□□□□ 0.53
RABIFP47224 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms