Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.64■□□□□ 0.73
MTHFRP42898 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
MTHFRP42898 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.64■□□□□ 0.73
MTHFRP42898 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MTHFRP42898 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MTHFRP42898 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MTHFRP42898 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MTHFRP42898 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.63■□□□□ 0.73
MTHFRP42898 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.63■□□□□ 0.73
MTHFRP42898 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.63■□□□□ 0.73
MTHFRP42898 AC104819.1-201ENST00000504587 486 ntBASIC19.63■□□□□ 0.73
MTHFRP42898 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.63■□□□□ 0.73
MTHFRP42898 RNF126P1-202ENST00000569893 925 ntBASIC19.63■□□□□ 0.73
MTHFRP42898 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
MTHFRP42898 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MTHFRP42898 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MTHFRP42898 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MTHFRP42898 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 KRT8P3-201ENST00000519669 1449 ntBASIC19.62■□□□□ 0.73
MTHFRP42898 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MTHFRP42898 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MTHFRP42898 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.62■□□□□ 0.73
MTHFRP42898 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 AC106795.1-205ENST00000512851 1056 ntBASIC19.62■□□□□ 0.73
MTHFRP42898 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.62■□□□□ 0.73
MTHFRP42898 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.62■□□□□ 0.73
MTHFRP42898 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.62■□□□□ 0.73
MTHFRP42898 PCDHAC2-203ENST00000615316 3011 ntBASIC19.62■□□□□ 0.73
MTHFRP42898 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MTHFRP42898 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MTHFRP42898 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MTHFRP42898 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.61■□□□□ 0.73
MTHFRP42898 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.61■□□□□ 0.73
MTHFRP42898 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MTHFRP42898 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.61■□□□□ 0.73
MTHFRP42898 AP002469.2-201ENST00000531724 424 ntBASIC19.61■□□□□ 0.73
MTHFRP42898 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.61■□□□□ 0.73
MTHFRP42898 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.61■□□□□ 0.73
MTHFRP42898 AC090616.6-201ENST00000582640 721 ntBASIC19.61■□□□□ 0.73
MTHFRP42898 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MTHFRP42898 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.61■□□□□ 0.73
MTHFRP42898 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
MTHFRP42898 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.61■□□□□ 0.73
MTHFRP42898 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms