Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.91■□□□□ 0.62
CCNFP41002 AL353708.3-201ENST00000610272 989 ntBASIC18.91■□□□□ 0.62
CCNFP41002 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 HTR7P1-201ENST00000538670 1336 ntBASIC18.91■□□□□ 0.62
CCNFP41002 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCNFP41002 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.9■□□□□ 0.62
CCNFP41002 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.9■□□□□ 0.62
CCNFP41002 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.9■□□□□ 0.62
CCNFP41002 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.9■□□□□ 0.62
CCNFP41002 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCNFP41002 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 AP002982.1-201ENST00000492365 877 ntBASIC18.9■□□□□ 0.62
CCNFP41002 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.9■□□□□ 0.62
CCNFP41002 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCNFP41002 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNFP41002 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.9■□□□□ 0.62
CCNFP41002 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCNFP41002 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.9■□□□□ 0.62
CCNFP41002 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNFP41002 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
CCNFP41002 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CCNFP41002 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCNFP41002 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CCNFP41002 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.89■□□□□ 0.62
CCNFP41002 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.89■□□□□ 0.62
CCNFP41002 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.89■□□□□ 0.62
CCNFP41002 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCNFP41002 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.89■□□□□ 0.61
CCNFP41002 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 TSPY23P-201ENST00000440136 739 ntBASIC18.89■□□□□ 0.61
CCNFP41002 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.89■□□□□ 0.61
CCNFP41002 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.89■□□□□ 0.61
CCNFP41002 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.89■□□□□ 0.61
CCNFP41002 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CCNFP41002 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.89■□□□□ 0.61
CCNFP41002 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCNFP41002 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCNFP41002 AL162741.1-201ENST00000565563 1558 ntBASIC18.89■□□□□ 0.61
CCNFP41002 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.89■□□□□ 0.61
CCNFP41002 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNFP41002 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCNFP41002 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.88■□□□□ 0.61
CCNFP41002 AC126763.1-201ENST00000552015 2118 ntBASIC18.88■□□□□ 0.61
CCNFP41002 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNFP41002 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNFP41002 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.88■□□□□ 0.61
CCNFP41002 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNFP41002 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNFP41002 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms