Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PTPN6P29350 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PTPN6P29350 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN6P29350 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PTPN6P29350 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 AL596275.1-201ENST00000423464 877 ntBASIC17.85■□□□□ 0.45
PTPN6P29350 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.85■□□□□ 0.45
PTPN6P29350 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PTPN6P29350 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN6P29350 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN6P29350 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN6P29350 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 HEIH-201ENST00000623091 1652 ntBASIC17.85■□□□□ 0.45
PTPN6P29350 AL133373.2-201ENST00000623187 2828 ntBASIC17.85■□□□□ 0.45
PTPN6P29350 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 RCC2P6-201ENST00000526625 1557 ntBASIC17.84■□□□□ 0.45
PTPN6P29350 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PTPN6P29350 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PTPN6P29350 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PTPN6P29350 AL353807.1-201ENST00000427475 662 ntBASIC17.84■□□□□ 0.45
PTPN6P29350 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN6P29350 AF186192.3-201ENST00000583427 947 ntBASIC17.84■□□□□ 0.45
PTPN6P29350 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 AP001412.1-201ENST00000608405 714 ntBASIC17.84■□□□□ 0.45
PTPN6P29350 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN6P29350 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 AL049637.2-201ENST00000641778 930 ntBASIC17.84■□□□□ 0.45
PTPN6P29350 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PTPN6P29350 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN6P29350 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTPN6P29350 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN6P29350 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN6P29350 MTMR9LP-203ENST00000426597 1545 ntBASIC17.83■□□□□ 0.45
PTPN6P29350 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
PTPN6P29350 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN6P29350 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN6P29350 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN6P29350 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.83■□□□□ 0.44
PTPN6P29350 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN6P29350 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN6P29350 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN6P29350 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN6P29350 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.83■□□□□ 0.44
PTPN6P29350 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN6P29350 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.83■□□□□ 0.44
PTPN6P29350 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN6P29350 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN6P29350 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PTPN6P29350 NOC2LP2-201ENST00000407594 1944 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 AC018470.1-201ENST00000624790 3129 ntBASIC17.82■□□□□ 0.44
PTPN6P29350 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN6P29350 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN6P29350 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms