Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH1P12830 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH1P12830 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH1P12830 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH1P12830 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH1P12830 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH1P12830 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH1P12830 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH1P12830 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 AC009113.1-201ENST00000570267 2443 ntBASIC18.32■□□□□ 0.52
CDH1P12830 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH1P12830 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH1P12830 DGCR10-201ENST00000609839 495 ntBASIC18.32■□□□□ 0.52
CDH1P12830 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH1P12830 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH1P12830 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH1P12830 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH1P12830 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 KRT17P2-201ENST00000300992 1314 ntBASIC18.31■□□□□ 0.52
CDH1P12830 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH1P12830 AC104581.1-202ENST00000635932 2618 ntBASIC18.31■□□□□ 0.52
CDH1P12830 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH1P12830 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 AL596275.1-201ENST00000423464 877 ntBASIC18.31■□□□□ 0.52
CDH1P12830 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH1P12830 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.31■□□□□ 0.52
CDH1P12830 AC097488.1-201ENST00000507834 756 ntBASIC18.31■□□□□ 0.52
CDH1P12830 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH1P12830 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH1P12830 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CDH1P12830 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH1P12830 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH1P12830 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH1P12830 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDH1P12830 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH1P12830 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH1P12830 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH1P12830 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH1P12830 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH1P12830 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH1P12830 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH1P12830 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH1P12830 MFAP1P1-201ENST00000442257 1255 ntBASIC18.3■□□□□ 0.52
CDH1P12830 RBM17P1-201ENST00000453646 1190 ntBASIC18.3■□□□□ 0.52
CDH1P12830 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 AL355075.4-201ENST00000554988 638 ntBASIC18.3■□□□□ 0.52
CDH1P12830 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH1P12830 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CDH1P12830 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH1P12830 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH1P12830 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH1P12830 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms