Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPM1P09493 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM1P09493 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.7■□□□□ 0.9
TPM1P09493 AC091874.3-201ENST00000512672 1195 ntBASIC20.7■□□□□ 0.9
TPM1P09493 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM1P09493 AC092118.2-201ENST00000613495 667 ntBASIC20.7■□□□□ 0.9
TPM1P09493 AL121829.2-201ENST00000620908 328 ntBASIC20.7■□□□□ 0.9
TPM1P09493 FZD10-202ENST00000539839 3282 ntBASIC20.7■□□□□ 0.9
TPM1P09493 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TPM1P09493 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 ABALON-201ENST00000629058 1903 ntBASIC20.7■□□□□ 0.9
TPM1P09493 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM1P09493 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM1P09493 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.69■□□□□ 0.9
TPM1P09493 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 AC026185.1-201ENST00000445748 174 ntBASIC20.69■□□□□ 0.9
TPM1P09493 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
TPM1P09493 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM1P09493 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM1P09493 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM1P09493 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
TPM1P09493 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 HLA-B-256ENST00000639848 1089 ntBASIC20.68■□□□□ 0.9
TPM1P09493 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM1P09493 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TPM1P09493 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.68■□□□□ 0.9
TPM1P09493 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM1P09493 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TPM1P09493 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM1P09493 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TPM1P09493 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM1P09493 AC073592.3-201ENST00000625118 1834 ntBASIC20.67■□□□□ 0.9
TPM1P09493 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TPM1P09493 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM1P09493 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM1P09493 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms