Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DPB1P04440 FEM1AP3-201ENST00000403722 1741 ntBASIC16.9■□□□□ 0.3
HLA-DPB1P04440 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 AC120498.8-201ENST00000614275 531 ntBASIC16.9■□□□□ 0.3
HLA-DPB1P04440 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DPB1P04440 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPB1P04440 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-DPB1P04440 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPB1P04440 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DPB1P04440 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-DPB1P04440 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AC083906.6-201ENST00000641366 219 ntBASIC16.89■□□□□ 0.29
HLA-DPB1P04440 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AL162741.1-201ENST00000565563 1558 ntBASIC16.89■□□□□ 0.29
HLA-DPB1P04440 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DPB1P04440 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 AP003097.1-201ENST00000530657 1135 ntBASIC16.88■□□□□ 0.29
HLA-DPB1P04440 MIR4651-201ENST00000582622 73 ntBASIC16.88■□□□□ 0.29
HLA-DPB1P04440 AC008403.3-201ENST00000598924 454 ntBASIC16.88■□□□□ 0.29
HLA-DPB1P04440 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DPB1P04440 AC067852.2-201ENST00000590513 2313 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms