Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 RCC2P6-201ENST00000526625 1557 ntBASIC15.79■□□□□ 0.12
CD74P04233 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CD74P04233 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CD74P04233 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.79■□□□□ 0.12
CD74P04233 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.79■□□□□ 0.12
CD74P04233 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 AC068587.9-201ENST00000641814 219 ntBASIC15.79■□□□□ 0.12
CD74P04233 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CD74P04233 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD74P04233 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.79■□□□□ 0.12
CD74P04233 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD74P04233 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 AC034268.1-201ENST00000441047 882 ntBASIC15.78■□□□□ 0.12
CD74P04233 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD74P04233 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.78■□□□□ 0.12
CD74P04233 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD74P04233 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD74P04233 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CD74P04233 AC112777.1-201ENST00000540175 1423 ntBASIC15.77■□□□□ 0.12
CD74P04233 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CD74P04233 AL645608.8-201ENST00000606034 2086 ntBASIC15.77■□□□□ 0.12
CD74P04233 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CD74P04233 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD74P04233 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CD74P04233 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD74P04233 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.77■□□□□ 0.12
CD74P04233 HCG11-201ENST00000411553 5696 ntBASIC15.77■□□□□ 0.12
CD74P04233 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD74P04233 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.77■□□□□ 0.12
CD74P04233 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.77■□□□□ 0.12
CD74P04233 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD74P04233 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.77■□□□□ 0.12
CD74P04233 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CD74P04233 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD74P04233 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.77■□□□□ 0.11
CD74P04233 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD74P04233 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CD74P04233 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms