Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ACTN4O43707 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.1■□□□□ 0.97
ACTN4O43707 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.1■□□□□ 0.97
ACTN4O43707 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.1■□□□□ 0.97
ACTN4O43707 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.09■□□□□ 0.97
ACTN4O43707 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 AC098590.1-201ENST00000468126 897 ntBASIC21.09■□□□□ 0.97
ACTN4O43707 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.09■□□□□ 0.97
ACTN4O43707 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.09■□□□□ 0.97
ACTN4O43707 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.09■□□□□ 0.97
ACTN4O43707 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 FAM197Y4-202ENST00000622692 608 ntBASIC21.09■□□□□ 0.97
ACTN4O43707 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ACTN4O43707 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.09■□□□□ 0.97
ACTN4O43707 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ACTN4O43707 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.08■□□□□ 0.97
ACTN4O43707 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ACTN4O43707 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 KRT18P29-201ENST00000397031 1267 ntBASIC21.08■□□□□ 0.97
ACTN4O43707 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACTN4O43707 FAM197Y1-201ENST00000421178 764 ntBASIC21.08■□□□□ 0.97
ACTN4O43707 FAM207BP-201ENST00000447172 505 ntBASIC21.08■□□□□ 0.97
ACTN4O43707 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.08■□□□□ 0.97
ACTN4O43707 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ACTN4O43707 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.08■□□□□ 0.97
ACTN4O43707 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.08■□□□□ 0.96
ACTN4O43707 AL357033.4-201ENST00000617703 1807 ntBASIC21.08■□□□□ 0.96
ACTN4O43707 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ACTN4O43707 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.08■□□□□ 0.96
ACTN4O43707 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ACTN4O43707 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.07■□□□□ 0.96
ACTN4O43707 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.07■□□□□ 0.96
ACTN4O43707 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
ACTN4O43707 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.07■□□□□ 0.96
ACTN4O43707 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ACTN4O43707 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACTN4O43707 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.06■□□□□ 0.96
ACTN4O43707 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.06■□□□□ 0.96
ACTN4O43707 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.06■□□□□ 0.96
ACTN4O43707 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.06■□□□□ 0.96
ACTN4O43707 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.06■□□□□ 0.96
ACTN4O43707 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.06■□□□□ 0.96
ACTN4O43707 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ACTN4O43707 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.06■□□□□ 0.96
ACTN4O43707 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.06■□□□□ 0.96
ACTN4O43707 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACTN4O43707 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms