Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.35■□□□□ 0.21
XRCC2O43543 AC130371.2-201ENST00000619443 611 ntBASIC16.35■□□□□ 0.21
XRCC2O43543 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC2O43543 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC2O43543 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC2O43543 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
XRCC2O43543 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC2O43543 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC2O43543 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
XRCC2O43543 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
XRCC2O43543 KRT8P3-201ENST00000519669 1449 ntBASIC16.35■□□□□ 0.21
XRCC2O43543 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC2O43543 AL512353.2-201ENST00000448759 1962 ntBASIC16.35■□□□□ 0.21
XRCC2O43543 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC2O43543 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
XRCC2O43543 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.34■□□□□ 0.21
XRCC2O43543 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 CKBP1-201ENST00000565489 1086 ntBASIC16.34■□□□□ 0.21
XRCC2O43543 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
XRCC2O43543 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.34■□□□□ 0.21
XRCC2O43543 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
XRCC2O43543 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.34■□□□□ 0.21
XRCC2O43543 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
XRCC2O43543 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.34■□□□□ 0.21
XRCC2O43543 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
XRCC2O43543 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.33■□□□□ 0.21
XRCC2O43543 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
XRCC2O43543 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
XRCC2O43543 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.33■□□□□ 0.21
XRCC2O43543 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 RPS2P55-201ENST00000397318 883 ntBASIC16.33■□□□□ 0.2
XRCC2O43543 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 AC011506.1-201ENST00000474329 610 ntBASIC16.33■□□□□ 0.2
XRCC2O43543 AC107956.1-201ENST00000494359 873 ntBASIC16.33■□□□□ 0.2
XRCC2O43543 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 DGCR10-201ENST00000609839 495 ntBASIC16.33■□□□□ 0.2
XRCC2O43543 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 AC007613.1-201ENST00000572811 2597 ntBASIC16.33■□□□□ 0.2
XRCC2O43543 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.33■□□□□ 0.2
XRCC2O43543 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.33■□□□□ 0.2
XRCC2O43543 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
XRCC2O43543 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
XRCC2O43543 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
XRCC2O43543 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC2O43543 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
XRCC2O43543 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
XRCC2O43543 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 ABHD17AP1-201ENST00000358206 933 ntBASIC16.32■□□□□ 0.2
XRCC2O43543 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
XRCC2O43543 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC2O43543 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.32■□□□□ 0.2
XRCC2O43543 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC2O43543 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC2O43543 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC2O43543 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.32■□□□□ 0.2
XRCC2O43543 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms