Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.43■■□□□ 1.18
FOXN1O15353 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.43■■□□□ 1.18
FOXN1O15353 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXN1O15353 MIR3197-201ENST00000582241 73 ntBASIC22.43■■□□□ 1.18
FOXN1O15353 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
FOXN1O15353 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.43■■□□□ 1.18
FOXN1O15353 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
FOXN1O15353 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
FOXN1O15353 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXN1O15353 MIR940-201ENST00000401276 94 ntBASIC22.42■■□□□ 1.18
FOXN1O15353 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
FOXN1O15353 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.42■■□□□ 1.18
FOXN1O15353 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.42■■□□□ 1.18
FOXN1O15353 AC106730.1-201ENST00000566722 1090 ntBASIC22.42■■□□□ 1.18
FOXN1O15353 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
FOXN1O15353 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.42■■□□□ 1.18
FOXN1O15353 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.42■■□□□ 1.18
FOXN1O15353 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXN1O15353 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 TREX1-205ENST00000625293 1783 ntBASIC22.41■■□□□ 1.18
FOXN1O15353 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 DRAXINP1-201ENST00000437611 948 ntBASIC22.41■■□□□ 1.18
FOXN1O15353 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.41■■□□□ 1.18
FOXN1O15353 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.41■■□□□ 1.18
FOXN1O15353 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXN1O15353 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXN1O15353 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.41■■□□□ 1.18
FOXN1O15353 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXN1O15353 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FOXN1O15353 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXN1O15353 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXN1O15353 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.4■■□□□ 1.18
FOXN1O15353 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXN1O15353 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.4■■□□□ 1.18
FOXN1O15353 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXN1O15353 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXN1O15353 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FOXN1O15353 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FOXN1O15353 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
FOXN1O15353 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.4■■□□□ 1.18
FOXN1O15353 AC087289.5-201ENST00000586076 3175 ntBASIC22.4■■□□□ 1.18
FOXN1O15353 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.4■■□□□ 1.18
FOXN1O15353 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
FOXN1O15353 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.39■■□□□ 1.18
FOXN1O15353 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXN1O15353 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
FOXN1O15353 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
FOXN1O15353 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.39■■□□□ 1.17
FOXN1O15353 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.39■■□□□ 1.17
FOXN1O15353 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.39■■□□□ 1.17
FOXN1O15353 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.39■■□□□ 1.17
FOXN1O15353 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXN1O15353 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FOXN1O15353 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.39■■□□□ 1.17
FOXN1O15353 KRT8P17-201ENST00000453110 1448 ntBASIC22.39■■□□□ 1.17
FOXN1O15353 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
FOXN1O15353 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.38■■□□□ 1.17
FOXN1O15353 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
FOXN1O15353 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms